TSS: Rfmm 103145.1: Difference between revisions

Revision as of 10:34, 13 November 2024

Basic information about the TSS

TSS ID:	rfmm_103145.1
Species:	mouse
Chr:	chr11

Start:	30840944
End:	30840944
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	BC125614:64 BC125616:64
GeneID:	237716
HGNC/MGI_ID:	MGI:2441843
UniProt_ID:
Nearer transcript ids and distances:	AY253852:153 AK044553:393 view more...

Gene_name:	Gpr75
Gene_symbol:	Gpr75
Gene_synonyms:
Gene_source:	MGI:2441843

TATA-Box annotation

Distance to TSS:	5586
Nearest PromoterID:	NM_175490.4
Entrez ID:	Gpr75
Nearest Unigene:	NM_175490
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Gpr75
Gene Alias:
Gene Type:
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=BC125614:64 BC125616:64 AY253852:153 AK044553:393
 |annotation=intron (XM_006514696.5, intron 1 of 1)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_175490.4
 |nearest_refseq=
+|nearest_transcripts=AY253852:153 AK044553:393
 |nearest_unigene=NM_175490
 |peak_score=1