TSS: Rfmm 151858.1: Difference between revisions
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=AY194859:32 AB352347:-60 AB350881:98 AB352917:98 BC042411:-348 DQ540853:420 DQ541113:-424 DQ553409:-436 AB349980:-444 K01380:496 | |||
|annotation=TTS (XM_036160881.1) | |annotation=TTS (XM_036160881.1) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=Rn18s-rs5 | |nearest_promoter_id=Rn18s-rs5 | ||
|nearest_refseq= | |nearest_refseq= | ||
|nearest_transcripts=AB352347:-60 AB350881:98 AB352917:98 BC042411:-348 DQ540853:420 DQ541113:-424 DQ553409:-436 AB349980:-444 K01380:496 | |||
|nearest_unigene=Rn18s-rs5 | |nearest_unigene=Rn18s-rs5 | ||
|peak_score=1 | |peak_score=1 |
Revision as of 23:41, 13 November 2024
Basic information about the TSS
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Source datasets | GSE117655 | |||||||||||||
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Protocol | deepCAGE | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
Description: | - |
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Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 1285 |
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Nearest PromoterID: | Rn18s-rs5 |
Entrez ID: | Rn18s-rs5 |
Nearest Unigene: | Rn18s-rs5 |
Nearest Refseq: | |
Nearest Ensembl: | |
Gene Name: | Rn18s-rs5 |
Gene Alias: | |
Gene Type: | NA |
CpG%: | 0.000000 |
GC%: | 1.000000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.