TSS: Rfhg 100055.1: Difference between revisions
From referenceTSS
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|tata_box= | |tata_box= | ||
|transcript_name=AK057857 | |transcript_name=AK057857 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_100055.1 | |tss_id=rfhg_100055.1 | ||
Latest revision as of 11:08, 13 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | dELS (EH38D4030863,EH38E2590492) |
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| Category: | dELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -21862 |
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| Nearest PromoterID: | NR_024086 |
| Entrez ID: | 53844 |
| Nearest Unigene: | Hs.6421 |
| Nearest Refseq: | NR_024086 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | CIT1|COPG2AS|DKFZP761N09121|NCRNA00170 |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.416667 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |