TSS: Rfhg 10063.1: Difference between revisions

Latest revision as of 11:18, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_10063.1
Species:	human
Chr:	chr1

Start:	101787292
End:	101787298
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000431241.1:73
GeneID:
HGNC/MGI_ID:	HGNC:36508
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	ribosomal protein SA pseudogene 19
Gene_symbol:	RPSAP19
Gene_synonyms:
Gene_source:	HGNC:36508

TATA-Box annotation

Distance to TSS:	59785
Nearest PromoterID:	NM_001288821
Entrez ID:	118427
Nearest Unigene:	Hs.484475
Nearest Refseq:	NM_058170
Nearest Ensembl:	ENSG00000118733
Gene Name:	ribosomal protein SA pseudogene 19
Gene Alias:	NOE3\|NOELIN3\|OPTIMEDIN
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=olfactomedin 3
 |gene_id=
-|gene_name=OLFM3
+|gene_name=ribosomal protein SA pseudogene 19
 |gene_source=HGNC:36508
 |gene_symbol=RPSAP19