TSS: Rfhg 100776.1: Difference between revisions

Latest revision as of 11:21, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_100776.1
Species:	human
Chr:	chr7

Start:	138797989
End:	138798012
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D4037914,EH38E2595197)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000442682.7:0 ENST00000458494.1:0 ENST00000413208.1:0 AK055841:0 BC058028:0
GeneID:	155006
HGNC/MGI_ID:	HGNC:27220
UniProt_ID:	A2RRL7
Nearer transcript ids and distances:	ENST00000472775.1:17 ENST00000397602.7:-37 BC131697:-37 KJ903903:-39 view more...

Gene_name:	transmembrane protein 213
Gene_symbol:	TMEM213
Gene_synonyms:
Gene_source:	HGNC:27220

TATA-Box annotation

Distance to TSS:	6
Nearest PromoterID:	NM_001085429
Entrez ID:	155006
Nearest Unigene:	Hs.567729
Nearest Refseq:	NM_001085429
Nearest Ensembl:	ENSG00000214128
Gene Name:	transmembrane protein 213
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.583333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=transmembrane protein 213
 |gene_id=155006
-|gene_name=TMEM213
+|gene_name=transmembrane protein 213
 |gene_source=HGNC:27220
 |gene_symbol=TMEM213
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000442682.7 ENST00000458494.1 ENST00000413208.1 NM_001085429.2 AK055841 BC058028
+|transcript_name=ENST00000442682.7 ENST00000458494.1 ENST00000413208.1 AK055841 BC058028
 |tss_cluster_detected=2
 |tss_id=rfhg_100776.1