TSS: Rfhg 100870.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 16: | Line 16: | ||
|gene_description=C-type lectin domain family 2 member L | |gene_description=C-type lectin domain family 2 member L | ||
|gene_id=154790 | |gene_id=154790 | ||
|gene_name= | |gene_name=C-type lectin domain family 2 member L | ||
|gene_source=HGNC:21969 | |gene_source=HGNC:21969 | ||
|gene_symbol=CLEC2L | |gene_symbol=CLEC2L | ||
| Line 35: | Line 35: | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000422142.7 | |transcript_name=ENST00000422142.7 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_100870.1 | |tss_id=rfhg_100870.1 | ||
Latest revision as of 11:23, 13 March 2025
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4038524,EH38E2595654) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 28 |
|---|---|
| Nearest PromoterID: | NM_001080511 |
| Entrez ID: | 154790 |
| Nearest Unigene: | Hs.57806 |
| Nearest Refseq: | NM_001080511 |
| Nearest Ensembl: | ENSG00000236279 |
| Gene Name: | C-type lectin domain family 2 member L |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.153846 |
| GC%: | 0.815217 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.