TSS: Rfhg 101036.1: Difference between revisions
From referenceTSS
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|gene_description=transmembrane protein 178B | |gene_description=transmembrane protein 178B | ||
|gene_id=100507421 | |gene_id=100507421 | ||
|gene_name= | |gene_name=transmembrane protein 178B | ||
|gene_source=HGNC:44112 | |gene_source=HGNC:44112 | ||
|gene_symbol=TMEM178B | |gene_symbol=TMEM178B | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000565468.6 | |transcript_name=ENST00000565468.6 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_101036.1 | |tss_id=rfhg_101036.1 | ||
Latest revision as of 11:26, 13 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS (EH38D4039954,EH38E2596740) |
|---|---|
| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_001195278 |
| Entrez ID: | 100507421 |
| Nearest Unigene: | Hs.283851 |
| Nearest Refseq: | NM_001195278 |
| Nearest Ensembl: | ENSG00000261115 |
| Gene Name: | transmembrane protein 178B |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.085106 |
| GC%: | 0.729167 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.