TSS: Rfhg 10135.1: Difference between revisions

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|gene_description=long intergenic non-protein coding RNA 1676
|gene_description=long intergenic non-protein coding RNA 1676
|gene_id=101928476
|gene_id=101928476
|gene_name=LINC01676
|gene_name=long intergenic non-protein coding RNA 1676
|gene_source=HGNC:52464
|gene_source=HGNC:52464
|gene_symbol=LINC01676
|gene_symbol=LINC01676
Line 35: Line 35:
|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENST00000652819.1 ENST00000624898.4 ENST00000657035.1 ENST00000659994.1 ENST00000669362.1 ENST00000610126.2 ENST00000669135.1 ENST00000661746.1 ENST00000623043.2 NR_125955.1 NR_125954.1 BC043293
|transcript_name=ENST00000652819.1 ENST00000624898.4 ENST00000657035.1 ENST00000659994.1 ENST00000669362.1 ENST00000610126.2 ENST00000669135.1 ENST00000661746.1 ENST00000623043.2 BC043293
|tss_cluster_detected=1
|tss_cluster_detected=1
|tss_id=rfhg_10135.1
|tss_id=rfhg_10135.1

Latest revision as of 11:30, 13 March 2025

Basic information about the TSS

TSS ID:rfhg_10135.1
Species:human
Chr:chr1
Start:105618931
End:105618939
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000652819.1:0
ENST00000624898.4:0
ENST00000657035.1:0
ENST00000659994.1:0
ENST00000669362.1:0
ENST00000610126.2:0
ENST00000669135.1:0
ENST00000661746.1:0
ENST00000623043.2:0
BC043293:0
GeneID:101928476
HGNC/MGI_ID:HGNC:52464
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000420901.5:13
  • ENST00000595309.6:-18
  • ENST00000435253.5:-19
  • ENST00000597635.6:-41
  • ENST00000600656.6:-52
  • ENST00000654698.1:-52
view more...
Gene_name:long intergenic non-protein coding RNA 1676
Gene_symbol:LINC01676
Gene_synonyms:
Gene_source:HGNC:52464



TATA-Box annotation

Distance to TSS:0
Nearest PromoterID:NR_125955
Entrez ID:101928476
Nearest Unigene:Hs.563856
Nearest Refseq:NR_125954
Nearest Ensembl:ENSG00000230768
Gene Name:long intergenic non-protein coding RNA 1676
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.333333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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