TSS: Rfhg 101780.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 16: | Line 16: | ||
|gene_description=RNA, Ro60-associated Y1 | |gene_description=RNA, Ro60-associated Y1 | ||
|gene_id=6084 | |gene_id=6084 | ||
|gene_name= | |gene_name=RNA, Ro60-associated Y1 | ||
|gene_source=HGNC:10242 | |gene_source=HGNC:10242 | ||
|gene_symbol=RNY1 | |gene_symbol=RNY1 | ||
| Line 35: | Line 35: | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000364228.1 | |transcript_name=ENST00000364228.1 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_101780.1 | |tss_id=rfhg_101780.1 | ||
Latest revision as of 11:38, 13 March 2025
Basic information about the TSS
|
| |||||||||||||
| Source datasets | PRJNA548673 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | ReCappable-seq | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4044995,EH38E2599786) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 26 |
|---|---|
| Nearest PromoterID: | NR_004391 |
| Entrez ID: | 6084 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_004391 |
| Nearest Ensembl: | ENSG00000201098 |
| Gene Name: | RNA, Ro60-associated Y1 |
| Gene Alias: | HY1|Y1 |
| Gene Type: | ncRNA |
| CpG%: | 0.025974 |
| GC%: | 0.435897 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.