TSS: Rfhg 108300.1: Difference between revisions

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|gene_description=sorting nexin 16
|gene_description=sorting nexin 16
|gene_id=101927141
|gene_id=101927141
|gene_name=SNX16
|gene_name=uncharacterized LOC101927141
|gene_source=EntrezGene:101927141
|gene_source=EntrezGene:101927141
|gene_symbol=LOC101927141
|gene_symbol=LOC101927141

Latest revision as of 13:39, 13 March 2025

Basic information about the TSS


TSS ID:rfhg_108300.1
Species:human
Chr:chr8
Start:82033765
End:82033775
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000659043.1:5
GeneID:101927141
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000663058.1:-232
Gene_name:uncharacterized LOC101927141
Gene_symbol:LOC101927141
Gene_synonyms:
Gene_source:EntrezGene:101927141



TATA-Box annotation


Distance to TSS:-191484
Nearest PromoterID:NM_022133
Entrez ID:64089
Nearest Unigene:Hs.492121
Nearest Refseq:NM_022133
Nearest Ensembl:ENSG00000104497
Gene Name:uncharacterized LOC101927141
Gene Alias:-
Gene Type:protein-coding
CpG%:0.000000
GC%:0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.