TSS: Rfhg 113122.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
 
Line 16: Line 16:
|gene_description=adenylate kinase 3
|gene_description=adenylate kinase 3
|gene_id=
|gene_id=
|gene_name=AK3
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 15:09, 13 March 2025

Basic information about the TSS


TSS ID:rfhg_113122.1
Species:human
Chr:chr9
Start:4741348
End:4741382
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D4167399,EH38E2679365)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000655730.1:359
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000663238.1:450
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-163
Nearest PromoterID:NM_016282
Entrez ID:50808
Nearest Unigene:Hs.732022
Nearest Refseq:NM_016282
Nearest Ensembl:ENSG00000147853
Gene Name:
Gene Alias:AK3L1|AK6|AKL3L|AKL3L1|FIX
Gene Type:protein-coding
CpG%:0.205882
GC%:0.828571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):