TSS: Rfhg 113948.1: Difference between revisions
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|gene_description=FOCAD antisense RNA 1 | |gene_description=FOCAD antisense RNA 1 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= |
Latest revision as of 15:25, 13 March 2025
Basic information about the TSS
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Source datasets | FANTOM5|PRJNA401781|PRJDB5282|PRJNA4843412|DRA013844 |PRJNA548673|PRJNA615891 | |||||||||||||||
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Protocol | CAGE|RAMPAGE|C1CAGE|NETCAGE|ReCappable-seq|SLIC_CAGE |TIF-seq2 | |||||||||||||||
TSS cluster detected* | 10 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | pELS,CTCF-bound (EH38D4178823,EH38E2686554) |
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Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 480 |
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Nearest PromoterID: | NR_121601 |
Entrez ID: | 101929548 |
Nearest Unigene: | Hs.668302 |
Nearest Refseq: | NR_121601 |
Nearest Ensembl: | ENSG00000227071 |
Gene Name: | |
Gene Alias: | - |
Gene Type: | ncRNA |
CpG%: | 0.071429 |
GC%: | 0.697674 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |