TSS:Rfhg 148912.1

Basic information about the TSS

---

TSS ID: rfhg_148912.1 TSS ID(Version3): hg_124838.1 hg_124839.1 Species: human Chr: chr12		Start: 27332853 End: 27332935 Strand: +
Source datasets	FANTOM5|PRJNA4843412|DRA013844
Protocol	CAGE|NETCAGE
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

---

Description:	PLS,CTCF-bound (EH38D2542068,EH38E1601002)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENST00000544915.5:0 ENST00000395901.6:0 ENST00000546179.5:0 AF256215:0 AK296706:0 GeneID: 56938 HGNC/MGI_ID: HGNC:18984 UniProt_ID: Q8WYA1 Nearer transcript ids and distances: NM_001394529.1:-17 NM_001394527.1:-17 NM_001248004.3:-17 NM_001394526.1:-17 NM_001248002.3:-17 NM_020183.6:-17 NM_001394528.1:-17 NM_001248005.3:-17 NM_001248003.3:-17 NM_001394525.1:-17 NM_001394524.1:-17 ENST00000311001.9:120 ENST00000261178.9:120 ENST00000266503.9:120 AF246960:120 AF246961:120 AF246962:120 AF246963:120 BC125062:120 BC125061:125 KJ902921:136 KJ902922:136 view more...

Gene_name: basic helix-loop-helix ARNT like 2 Gene_symbol: BMAL2 Gene_synonyms: CLIF MOP9 PASD9 bHLHe6 Gene_source: HGNC:18984

TATA-Box annotation

---

Distance to TSS:	58
Nearest PromoterID:	NM_020183
Entrez ID:	56938
Nearest Unigene:	Hs.445447
Nearest Refseq:	NM_020183
Nearest Ensembl:	ENSG00000029153
Gene Name:	basic helix-loop-helix ARNT like 2
Gene Alias:	BMAL2|CLIF|MOP9|PASD9|bHLHe6
Gene Type:	protein-coding
CpG%:	0.146341
GC%:	0.783133
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "NM_001394529.1:-17 NM_001394527.1:-17 NM_001248004.3:-17 NM_001394526.1:-17 NM_001248002.3:-17 NM_020183.6:-17 NM_001394528.1:-17 NM_001248005.3:-17 NM_001248003.3:-17 NM_001394525.1:-17 NM_001394524.1:-17 ENST00000311001.9:120 ENST00000261178.9:120 ENST00000266503.9:120 AF246960:120 AF246961:120 AF246962:120 AF246963:120 BC125062:120 BC125061:125 KJ902921:136 KJ902922:136" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.