TSS: Rfhg 149083.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 16: | Line 16: | ||
|gene_description=uncharacterized LOC645485 | |gene_description=uncharacterized LOC645485 | ||
|gene_id=645485 | |gene_id=645485 | ||
|gene_name=LOC645485 | |gene_name=uncharacterized LOC645485 | ||
|gene_source=EntrezGene:645485 | |gene_source=EntrezGene:645485 | ||
|gene_symbol=LOC645485 | |gene_symbol=LOC645485 | ||
| Line 35: | Line 35: | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000500076.2 | |transcript_name=ENST00000500076.2 BC039526 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_149083.1 | |tss_id=rfhg_149083.1 | ||
Latest revision as of 02:32, 14 March 2025
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2544819,EH38E1602694) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 13 |
|---|---|
| Nearest PromoterID: | NR_135046 |
| Entrez ID: | 645485 |
| Nearest Unigene: | Hs.232332 |
| Nearest Refseq: | NR_135046 |
| Nearest Ensembl: | ENSG00000246331 |
| Gene Name: | uncharacterized LOC645485 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.538462 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.