TSS: Rfhg 163890.1: Difference between revisions
From referenceTSS
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|gene_description=long intergenic non-protein coding RNA 2332 | |gene_description=long intergenic non-protein coding RNA 2332 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=T cell receptor alpha joining 6 | ||
|gene_source=HGNC:12092 | |gene_source=HGNC:12092 | ||
|gene_symbol=TRAJ6 | |gene_symbol=TRAJ6 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000390531.1 | |transcript_name=ENST00000390531.1 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_163890.1 | |tss_id=rfhg_163890.1 | ||
Latest revision as of 07:11, 14 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D2699334,EH38E1702336) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 17986 |
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| Nearest PromoterID: | NR_146543 |
| Entrez ID: | 105370400 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_146543 |
| Nearest Ensembl: | ENSG00000259054 |
| Gene Name: | T cell receptor alpha joining 6 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.526316 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.