TSS: Rfhg 169466.1: Difference between revisions

Latest revision as of 08:57, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_169466.1
Species:	human
Chr:	chr14

Start:	93185305
End:	93185325
Strand:	+

Source datasets

PRJNA4843412|DRA013844

Protocol

NETCAGE|CAGE

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D2752888,EH38E1737601)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000415050.3:0
GeneID:	26175
HGNC/MGI_ID:	HGNC:20218
UniProt_ID:	Q8N6I4
Nearer transcript ids and distances:	ENST00000557574.1:-312 BC030119:-316 AL080118:-319 ENST00000557048.1:-331 NM_015676.3:-331 ENST00000554824.5:-332 ENST00000283534.4:-354 view more...

Gene_name:	lysosomal enzyme trafficking factor
Gene_symbol:	LYSET
Gene_synonyms:	DKFZP564F1123 GCAF
Gene_source:	HGNC:20218

TATA-Box annotation

Distance to TSS:	341
Nearest PromoterID:	NM_015676
Entrez ID:	26175
Nearest Unigene:	Hs.275352
Nearest Refseq:	NM_015676
Nearest Ensembl:	ENSG00000153485
Gene Name:	lysosomal enzyme trafficking factor
Gene Alias:	C14orf109
Gene Type:	protein-coding
CpG%:	0.050000
GC%:	0.428571
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=transmembrane protein 251
 |gene_id=26175
-|gene_name=TMEM251
+|gene_name=lysosomal enzyme trafficking factor
 |gene_source=HGNC:20218
 |gene_symbol=LYSET
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000415050.3 NM_001098621.4
+|transcript_name=ENST00000415050.3
 |tss_cluster_detected=2
 |tss_id=rfhg_169466.1