TSS: Rfhg 171984.1: Difference between revisions

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|gene_description=Rho GTPase activating protein 11A
|gene_description=Rho GTPase activating protein 11A
|gene_id=9824
|gene_id=9824
|gene_name=ARHGAP11A
|gene_name=Rho GTPase activating protein 11A
|gene_source=HGNC:15783
|gene_source=HGNC:15783
|gene_symbol=ARHGAP11A
|gene_symbol=ARHGAP11A
Line 35: Line 35:
|strand=+
|strand=+
|tata_box=
|tata_box=
|transcript_name=ENST00000361627.8 NM_001368319.1 NM_199357.3 NM_001286480.3 NM_014783.6 D87717
|transcript_name=ENST00000361627.8 D87717
|tss_cluster_detected=13
|tss_cluster_detected=13
|tss_id=rfhg_171984.1
|tss_id=rfhg_171984.1

Latest revision as of 09:42, 14 March 2025

Basic information about the TSS

TSS ID:rfhg_171984.1
TSS ID(Version3):hg_145695.1
Species:human
Chr:chr15
Start:32615472
End:32615534
Strand:+
Source datasetsFANTOM5|DRA000914|PRJNA401781|PRJNA548673|PRJNA615891
|PRJNA4843412|DRA013844|PRJNA597322|PRJDB5282
ProtocolCAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE|NETCAGE|STRIPE-seq
|oligo_capping|C1CAGE|TIF-seq2
TSS cluster detected*13

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS,CTCF-bound (EH38D2773038,EH38E1751284)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000361627.8:0
D87717:0
GeneID:9824
HGNC/MGI_ID:HGNC:15783
UniProt_ID:Q6P4F7
Nearer transcript ids and distances:
  • BC050545:1
  • ENST00000567348.5:5
  • BC063444:5
  • MH721904:-24
  • ENST00000563864.5:31
  • ENST00000543522.5:37
  • BC039563:101
  • ENST00000563330.1:-320
  • ENST00000565905.5:-328
  • NM_001286479.3:-328
  • AK316437:-328
view more...
Gene_name:Rho GTPase activating protein 11A
Gene_symbol:ARHGAP11A
Gene_synonyms:KIAA0013
Gene_source:HGNC:15783



TATA-Box annotation

Distance to TSS:-1
Nearest PromoterID:NM_001286480
Entrez ID:9824
Nearest Unigene:Hs.591130
Nearest Refseq:NM_014783
Nearest Ensembl:ENSG00000198826
Gene Name:Rho GTPase activating protein 11A
Gene Alias:GAP (1-12)
Gene Type:protein-coding
CpG%:0.048387
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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