TSS: Rfhg 176458.1: Difference between revisions

Latest revision as of 11:06, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_176458.1
Species:	human
Chr:	chr15

Start:	74461260
End:	74461270
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2809920,EH38E1777703)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000564137.5:0 ENST00000499217.6:0 BC014373:0
GeneID:	440288
HGNC/MGI_ID:	HGNC:48614
UniProt_ID:
Nearer transcript ids and distances:	ENST00000657781.1:9 ENST00000664892.1:28 ENST00000567286.5:37 ENST00000666989.1:37 ENST00000659591.1:37 ENST00000564621.2:37 ENST00000568853.1:74 AF085896:90 ENST00000670462.1:140 BC121819:331 view more...

Gene_name:	UBL7 divergent transcript
Gene_symbol:	UBL7-DT
Gene_synonyms:
Gene_source:	HGNC:48614

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NR_038448
Entrez ID:	440288
Nearest Unigene:	Hs.611046
Nearest Refseq:	NR_038448
Nearest Ensembl:	ENSG00000247240
Gene Name:	UBL7 divergent transcript
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.100000
GC%:	0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=UBL7 antisense RNA 1 (head to head)
 |gene_id=440288
-|gene_name=UBL7-AS1
+|gene_name=UBL7 divergent transcript
 |gene_source=HGNC:48614
 |gene_symbol=UBL7-DT
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000564137.5 ENST00000499217.6 NR_120377.1 NR_038449.1 NR_038448.1 BC014373
+|transcript_name=ENST00000564137.5 ENST00000499217.6 BC014373
 |tss_cluster_detected=1
 |tss_id=rfhg_176458.1