TSS: Rfhg 192267.1: Difference between revisions

Latest revision as of 16:02, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_192267.1
Species:	human
Chr:	chr17

Start:	36001562
End:	36001577
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2926438,EH38E1858749)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000617897.2:9
GeneID:	6359
HGNC/MGI_ID:	HGNC:10613
UniProt_ID:	Q16663
Nearer transcript ids and distances:	ENST00000610751.4:11 U58914:11 Z70292:15 Z70293:15 ENST00000616694.1:-44 BC140941:-44 AF031587:70 KJ897525:70 AB463484:70 NR_027921.3:-461 NR_027922.3:-461 view more...

Gene_name:	C-C motif chemokine ligand 15
Gene_symbol:	CCL15
Gene_synonyms:	HCC-2 HMRP-2B Lkn-1 MIP-1d MIP-5 NCC-3 SCYL3
Gene_source:	HGNC:10613

TATA-Box annotation

Distance to TSS:	-16
Nearest PromoterID:	NM_032965
Entrez ID:	6359
Nearest Unigene:	Hs.272493
Nearest Refseq:	NM_004167
Nearest Ensembl:	ENSG00000275718
Gene Name:	C-C motif chemokine ligand 15
Gene Alias:	HCC-2\|HMRP-2B\|LKN-1\|LKN1\|MIP-1 delta\|MIP-1D\|MIP-5\|MRP-2B\|NCC-3\|NCC3\|SCYA15\|SCYL3\|SY15
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=C-C motif chemokine ligand 15
 |gene_id=6359
-|gene_name=CCL15
+|gene_name=C-C motif chemokine ligand 15
 |gene_source=HGNC:10613
 |gene_symbol=CCL15
@@ Line 35: / Line 35: @@
 |strand=-
 |tata_box=
-|transcript_name=ENST00000617897.2 NM_032965.6
+|transcript_name=ENST00000617897.2
 |tss_cluster_detected=1
 |tss_id=rfhg_192267.1