TSS: Rfhg 19957.1: Difference between revisions

Latest revision as of 18:21, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_19957.1
TSS ID(Version3):	hg_8595.1
Species:	human
Chr:	chr1

Start:	218285284
End:	218285342
Strand:	+

Source datasets

Protocol

TSS cluster detected^*

15

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2277723,EH38E1422938)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000366932.4:0 ENST00000491428.1:0 AK290066:0 BC003668:0 BC020641:0
GeneID:	51018
HGNC/MGI_ID:	HGNC:24255
UniProt_ID:	A0JLN3 A8K201 Q9Y3B9
Nearer transcript ids and distances:	AF151873:10

Gene_name:	ribosomal RNA processing 15 homolog
Gene_symbol:	RRP15
Gene_synonyms:	CGI-115
Gene_source:	HGNC:24255

TATA-Box annotation

Distance to TSS:	20
Nearest PromoterID:	NM_016052
Entrez ID:	51018
Nearest Unigene:	Hs.660109
Nearest Refseq:	NM_016052
Nearest Ensembl:	ENSG00000067533
Gene Name:	ribosomal RNA processing 15 homolog
Gene Alias:	CGI-115\|KIAA0507
Gene Type:	protein-coding
CpG%:	0.120690
GC%:	0.644068
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=ribosomal RNA processing 15 homolog
 |gene_id=51018
-|gene_name=RRP15
+|gene_name=ribosomal RNA processing 15 homolog
 |gene_source=HGNC:24255
 |gene_symbol=RRP15
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000366932.4 ENST00000491428.1 NM_016052.4 AK290066 BC003668 BC020641
+|transcript_name=ENST00000366932.4 ENST00000491428.1 AK290066 BC003668 BC020641
 |tss_cluster_detected=15
 |tss_id=rfhg_19957.1