TSS: Rfhg 236204.1: Difference between revisions
From referenceTSS
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|gene_description=SPANX family member N5 | |gene_description=SPANX family member N5 | ||
|gene_id=494197 | |gene_id=494197 | ||
|gene_name= | |gene_name=SPANX family member N5 | ||
|gene_source=HGNC:33178 | |gene_source=HGNC:33178 | ||
|gene_symbol=SPANXN5 | |gene_symbol=SPANXN5 | ||
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|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000375511 | |transcript_name=ENST00000375511.4 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_236204.1 | |tss_id=rfhg_236204.1 | ||
Latest revision as of 05:32, 15 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001009616 |
| Entrez ID: | 494197 |
| Nearest Unigene: | Hs.535218 |
| Nearest Refseq: | NM_001009616 |
| Nearest Ensembl: | ENSG00000204363 |
| Gene Name: | SPANX family member N5 |
| Gene Alias: | CT11.10|SPANX-N5 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.714286 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.