TSS: Rfhg 238698.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
 
Line 16: Line 16:
|gene_description=solute carrier family 25 member 43
|gene_description=solute carrier family 25 member 43
|gene_id=203427
|gene_id=203427
|gene_name=SLC25A43
|gene_name=solute carrier family 25 member 43
|gene_source=HGNC:30557
|gene_source=HGNC:30557
|gene_symbol=SLC25A43
|gene_symbol=SLC25A43
Line 35: Line 35:
|strand=+
|strand=+
|tata_box=
|tata_box=
|transcript_name=ENST00000217909.8 ENST00000488158.5 NM_145305.3 AK094254 BC071871 AK303932 AK091304 AK292035
|transcript_name=ENST00000217909.8 ENST00000488158.5 AK094254 BC071871 AK303932 AK091304 AK292035
|tss_cluster_detected=2
|tss_cluster_detected=2
|tss_id=rfhg_238698.1
|tss_id=rfhg_238698.1

Latest revision as of 06:19, 15 March 2025

Basic information about the TSS

TSS ID:rfhg_238698.1
Species:human
Chr:chrX
Start:119399307
End:119399401
Strand:+
Source datasetsPRJNA4843412|DRA013844
ProtocolNETCAGE|CAGE
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:pELS,CTCF-bound (EH38D4306591,EH38E2766116)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000217909.8:0
ENST00000488158.5:0
AK094254:0
BC071871:0
AK303932:0
AK091304:0
AK292035:0
GeneID:203427
HGNC/MGI_ID:HGNC:30557
UniProt_ID:A8K7M0 B4E1P8 Q8WUT9
Nearer transcript ids and distances:
  • CU676444:3
  • HQ447835:3
  • KJ900434:3
  • ENST00000493093.5:8
  • AL590525:126
  • BC019584:-247
view more...
Gene_name:solute carrier family 25 member 43
Gene_symbol:SLC25A43
Gene_synonyms:
Gene_source:HGNC:30557



TATA-Box annotation

Distance to TSS:18
Nearest PromoterID:NM_145305
Entrez ID:203427
Nearest Unigene:Hs.496658
Nearest Refseq:NM_145305
Nearest Ensembl:ENSG00000077713
Gene Name:solute carrier family 25 member 43
Gene Alias:-
Gene Type:protein-coding
CpG%:0.127660
GC%:0.831579
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
Retrieved from "https://reftss.riken.jp/reftss/index.php?title=TSS:Rfhg_238698.1&oldid=3722891"