TSS: Rfhg 25000.1: Difference between revisions

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Line 16: Line 16:
|gene_description=calpain 14
|gene_description=calpain 14
|gene_id=440854
|gene_id=440854
|gene_name=CAPN14
|gene_name=calpain 14
|gene_source=HGNC:16664
|gene_source=HGNC:16664
|gene_symbol=CAPN14
|gene_symbol=CAPN14
Line 35: Line 35:
|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENST00000403897.4 NM_001145122.2 AK296910
|transcript_name=ENST00000403897.4 AK296910
|tss_cluster_detected=2
|tss_cluster_detected=2
|tss_id=rfhg_25000.1
|tss_id=rfhg_25000.1

Latest revision as of 07:21, 15 March 2025

Basic information about the TSS

TSS ID:rfhg_25000.1
Species:human
Chr:chr2
Start:31217512
End:31217519
Strand:-
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000403897.4:0
AK296910:0
GeneID:440854
HGNC/MGI_ID:HGNC:16664
UniProt_ID:A8MX76 B7Z467
Nearer transcript ids and distances:
    Gene_name:calpain 14
    Gene_symbol:CAPN14
    Gene_synonyms:
    Gene_source:HGNC:16664



    TATA-Box annotation

    Distance to TSS:0
    Nearest PromoterID:NM_001145122
    Entrez ID:440854
    Nearest Unigene:Hs.468059
    Nearest Refseq:NM_001145122
    Nearest Ensembl:ENSG00000214711
    Gene Name:calpain 14
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.
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