TSS: Rfhg 34411.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 16: | Line 16: | ||
|gene_description=xin actin binding repeat containing 2 | |gene_description=xin actin binding repeat containing 2 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
Latest revision as of 10:11, 15 March 2025
Basic information about the TSS
|
| |||||||||||||
| Source datasets | PRJNA4843412|DRA013844 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | NETCAGE|CAGE | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D3204973,EH38E2048690) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 105643 |
|---|---|
| Nearest PromoterID: | NM_001199145 |
| Entrez ID: | 129446 |
| Nearest Unigene: | Hs.73680 |
| Nearest Refseq: | NM_152381 |
| Nearest Ensembl: | ENSG00000163092 |
| Gene Name: | |
| Gene Alias: | CMYA3 |
| Gene Type: | protein-coding |
| CpG%: | 0.140845 |
| GC%: | 0.750000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |