TSS: Rfhg 43409.1: Difference between revisions
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Latest revision as of 13:01, 15 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS,CTCF-bound (EH38D3406719,EH38E2187441) |
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| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 198 |
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| Nearest PromoterID: | NM_005442 |
| Entrez ID: | 8320 |
| Nearest Unigene: | Hs.591663 |
| Nearest Refseq: | NM_005442 |
| Nearest Ensembl: | ENSG00000163508 |
| Gene Name: | |
| Gene Alias: | TBR2 |
| Gene Type: | protein-coding |
| CpG%: | 0.250000 |
| GC%: | 0.800000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "BC131712:-167 AB031038:-167 LP880234:-167 LP882063:-167 LQ882854:-167 MB143792:-167 MB423116:-167 MP584504:-167 AB463608:-168 BC037568:-185 ENST00000449599.4:-196 NM_001278182.2:-196 NM_005442.4:-196 LF378840:-353 MA614417:-353 ENST00000295743.8:-371 LF378839:-465 MA614416:-465" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.