TSS: Rfhg 45578.1: Difference between revisions
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|gene_description=DDB1 and CUL4 associated factor 1 | |gene_description=DDB1 and CUL4 associated factor 1 | ||
|gene_id=9730 | |gene_id=9730 | ||
|gene_name= | |gene_name=DDB1 and CUL4 associated factor 1 | ||
|gene_source=HGNC:30911 | |gene_source=HGNC:30911 | ||
|gene_symbol=DCAF1 | |gene_symbol=DCAF1 | ||
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|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000423656.5 ENST00000504652.5 ENST00000684031.1 | |transcript_name=ENST00000423656.5 ENST00000504652.5 ENST00000684031.1 AB018343 BC110371 | ||
|tss_cluster_detected=13 | |tss_cluster_detected=13 | ||
|tss_id=rfhg_45578.1 | |tss_id=rfhg_45578.1 |
Latest revision as of 13:42, 15 March 2025
Basic information about the TSS
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Source datasets | FANTOM5|EPD|DRA000914|ENCODE|PRJNA401781|PRJNA548673 |PRJNA615891|PRJNA4843412|DRA013844 | |||||||||||||||
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Protocol | CAGE|TSS_database|RAMPAGE|ReCappable-seq|SLIC_CAGE |oligo_capping|TIF-seq2|NETCAGE | |||||||||||||||
TSS cluster detected* | 13 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D3427064,EH38E2201668) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 9 |
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Nearest PromoterID: | NM_001171904 |
Entrez ID: | 9730 |
Nearest Unigene: | Hs.716623 |
Nearest Refseq: | NM_014703 |
Nearest Ensembl: | ENSG00000145041 |
Gene Name: | DDB1 and CUL4 associated factor 1 |
Gene Alias: | RIP|VPRBP |
Gene Type: | protein-coding |
CpG%: | 0.107143 |
GC%: | 0.611765 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.