TSS: Rfhg 55361.1: Difference between revisions

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|gene_description=HAUS augmin like complex subunit 3
|gene_description=HAUS augmin like complex subunit 3
|gene_id=353497 79441
|gene_id=353497 79441
|gene_name=HAUS3
|gene_name=DNA polymerase nu; HAUS augmin like complex subunit 3
|gene_source=HGNC:18870 HGNC:28719
|gene_source=HGNC:18870 HGNC:28719
|gene_symbol=HAUS3 POLN
|gene_symbol=HAUS3 POLN
Line 35: Line 35:
|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENST00000511885.6 ENST00000672725.1 ENST00000515357.5 ENST00000506763.5 ENST00000443786.3 ENST00000514395.1 NM_181808.4 NM_001303143.2 NM_024511.7 AK303673 AK293948 AK056134
|transcript_name=ENST00000511885.6 ENST00000672725.1 ENST00000515357.5 ENST00000506763.5 ENST00000443786.3 ENST00000514395.1 AK303673 AK293948 AK056134
|tss_cluster_detected=1
|tss_cluster_detected=1
|tss_id=rfhg_55361.1
|tss_id=rfhg_55361.1

Latest revision as of 16:48, 15 March 2025

Basic information about the TSS

TSS ID:rfhg_55361.1
Species:human
Chr:chr4
Start:2242047
End:2242057
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation

Description:PLS,CTCF-bound (EH38D3540822,EH38E2275405)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENST00000511885.6:-64
ENST00000672725.1:-64
ENST00000515357.5:-64
ENST00000506763.5:-64
ENST00000443786.3:-64
ENST00000514395.1:-64
AK303673:-64
AK293948:-64
AK056134:-64
GeneID:353497 79441
HGNC/MGI_ID:HGNC:18870 HGNC:28719
UniProt_ID:A0A5F9ZHQ7 D6R993 Q68CZ6 Q7Z5Q5
Nearer transcript ids and distances:
  • ENST00000502440.1:-71
  • ENST00000243706.8:-76
  • CR749640:-76
  • BC003648:-107
  • ENST00000672739.1:-219
view more...
Gene_name:DNA polymerase nu; HAUS augmin like complex subunit 3
Gene_symbol:HAUS3 POLN
Gene_synonyms:IT1 MGC4701 dgt3
Gene_source:HGNC:18870 HGNC:28719



TATA-Box annotation

Distance to TSS:69
Nearest PromoterID:NM_001303143
Entrez ID:79441
Nearest Unigene:Hs.665869
Nearest Refseq:NM_024511
Nearest Ensembl:ENSG00000214367
Gene Name:DNA polymerase nu; HAUS augmin like complex subunit 3
Gene Alias:C4orf15|IT1|dgt3
Gene Type:protein-coding
CpG%:0.000000
GC%:0.545455
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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