TSS: Rfhg 68877.1: Difference between revisions

From referenceTSS
Jump to: navigation, search
No edit summary
No edit summary
 
Line 16: Line 16:
|gene_description=Rho guanine nucleotide exchange factor 28
|gene_description=Rho guanine nucleotide exchange factor 28
|gene_id=
|gene_id=
|gene_name=ARHGEF28
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 21:05, 15 March 2025

Basic information about the TSS


TSS ID:rfhg_68877.1
Species:human
Chr:chr5
Start:73684957
End:73684957
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D3717157,EH38E2381982)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:BC167854:-107
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AB384658:-108
  • AB082529:-119
  • BC171850:-119
  • BC157846:-119
  • ENST00000437974.5:-125
  • ENST00000426542.6:-125
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:58799
Nearest PromoterID:NM_001177693
Entrez ID:64283
Nearest Unigene:Hs.482521
Nearest Refseq:NM_001080479
Nearest Ensembl:ENSG00000214944
Gene Name:
Gene Alias:RGNEF|RIP2|p190RHOGEF
Gene Type:protein-coding
CpG%:0.000000
GC%:1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):