TSS: Rfhg 79266.1: Difference between revisions

Latest revision as of 00:20, 16 March 2025

Basic information about the TSS

TSS ID:	rfhg_79266.1
Species:	human
Chr:	chr6

Start:	25754734
End:	25754752
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS (EH38D3826385,EH38E2455499)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000377905.9:0 AB020527:0 AK293354:0
GeneID:	10050
HGNC/MGI_ID:	HGNC:10932
UniProt_ID:	A0A024R013
Nearer transcript ids and distances:	ENST00000439485.6:-35 NM_001286121.1:-35 AK024903:-35 view more...

Gene_name:	solute carrier family 17 member 4
Gene_symbol:	SLC17A4
Gene_synonyms:	KIAA2138
Gene_source:	HGNC:10932

TATA-Box annotation

Distance to TSS:	1
Nearest PromoterID:	NM_005495
Entrez ID:	10050
Nearest Unigene:	Hs.282931
Nearest Refseq:	NM_005495
Nearest Ensembl:	ENSG00000146039
Gene Name:	solute carrier family 17 member 4
Gene Alias:	KAIA2138
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.210526
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=solute carrier family 17 member 4
 |gene_id=10050
-|gene_name=SLC17A4
+|gene_name=solute carrier family 17 member 4
 |gene_source=HGNC:10932
 |gene_symbol=SLC17A4
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000377905.9 NM_005495.3 AB020527 AK293354
+|transcript_name=ENST00000377905.9 AB020527 AK293354
 |tss_cluster_detected=2
 |tss_id=rfhg_79266.1