TSS: Rfhg 79378.1: Difference between revisions

Latest revision as of 00:22, 16 March 2025

Basic information about the TSS

TSS ID:	rfhg_79378.1
Species:	human
Chr:	chr6

Start:	26158117
End:	26158119
Strand:	-

Source datasets

PRJNA4843412

Protocol

NETCAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3826789,EH38E2455800)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-3
Nearest PromoterID:	NM_021063
Entrez ID:	3017
Nearest Unigene:	Hs.591797
Nearest Refseq:	NM_021063
Nearest Ensembl:	ENSG00000158373
Gene Name:
Gene Alias:	H2B.1B\|H2B/a\|H2B/b\|H2B/g\|H2B/h\|H2B/k\|H2B/l\|H2BFA\|H2BFB\|H2BFG\|H2BFH\|H2BFK\|H2BFL\|HIRIP2\|HIST1H2BC\|HIST1H2BE\|HIST1H2BF\|HIST1H2BG\|HIST1H2BI\|dJ221C16.6
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=histone cluster 1 H2B family member d
 |gene_id=
-|gene_name=HIST1H2BD
+|gene_name=
 |gene_source=
 |gene_symbol=