TSS: Rfhg 94555.1: Difference between revisions
From referenceTSS
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|gene_description=spermatogenesis associated 48 | |gene_description=spermatogenesis associated 48 | ||
|gene_id=100130988 | |gene_id=100130988 | ||
|gene_name= | |gene_name=spermatogenesis associated 48 | ||
|gene_source=HGNC:22564 | |gene_source=HGNC:22564 | ||
|gene_symbol=SPATA48 | |gene_symbol=SPATA48 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000297001.7 | |transcript_name=ENST00000297001.7 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_94555.1 | |tss_id=rfhg_94555.1 | ||
Latest revision as of 05:07, 16 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -224 |
|---|---|
| Nearest PromoterID: | NM_001161834 |
| Entrez ID: | 100130988 |
| Nearest Unigene: | Hs.99248 |
| Nearest Refseq: | NM_001161834 |
| Nearest Ensembl: | ENSG00000164500 |
| Gene Name: | spermatogenesis associated 48 |
| Gene Alias: | C7orf72 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.440000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.