TSS:Rfmm 100038.1

Basic information about the TSS

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TSS ID: rfmm_100038.1 Species: mouse Chr: chr10		Start: 115423645 End: 115423673 Strand: -
Source datasets	FANTOM5|EPD|DRA000914
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*	3

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2342091,EM10E0964639)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000105272.8:0 ENSMUST00000149008.2:0 ENSMUST00000129309.2:0 AK047873:0 AK134981:0 GeneID: 14160 HGNC/MGI_ID: MGI:1341817 UniProt_ID: Q8C8A7 Nearer transcript ids and distances: ENSMUST00000020350.15:-12 NM_010195.2:-12 AK132387:-12 BC156649:243 ENSMUST00000172806.8:247 ENSMUST00000173740.2:247 AF110818:247 view more...

Gene_name: leucine rich repeat containing G protein coupled receptor 5 Gene_symbol: Lgr5 Gene_synonyms: Gpr49 Gene_source: MGI:1341817

TATA-Box annotation

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Distance to TSS:	26
Nearest PromoterID:	NM_010195.2
Entrez ID:	Lgr5
Nearest Unigene:	NM_010195
Nearest Refseq:
Nearest Ensembl:
Gene Name:	leucine rich repeat containing G protein coupled receptor 5
Gene Alias:
Gene Type:
CpG%:	0.035714
GC%:	0.620690
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.