TSS: Rfmm 136429.1: Difference between revisions
From referenceTSS
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|gene_description= | |gene_description= | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=predicted gene, 38563 | ||
|gene_source=MGI:5621448 | |gene_source=MGI:5621448 | ||
|gene_symbol=Gm38563 | |gene_symbol=Gm38563 | ||
Latest revision as of 02:41, 19 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5|DRA000914 | |||||||||||||
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| Protocol | CAGE|CAGE_and_CAGEscan | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | PLS,CTCF-bound (EM10D1467543,EM10E0600514) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 682 |
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| Nearest PromoterID: | XR_003951517.2 |
| Entrez ID: | Gm38563 |
| Nearest Unigene: | XR_003951517 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | predicted gene, 38563 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.000000 |
| GC%: | 0.368421 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): | 0(TCTTTAATAGTC,+,0.00) |
TSS expression
Expression data not found.