TSS: Rfmm 141553.1: Difference between revisions

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Latest revision as of 04:08, 19 March 2025

Basic information about the TSS


TSS ID:rfmm_141553.1
Species:mouse
Chr:chr16
Start:6967632
End:6967659
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:dELS,CTCF-bound (EM10D2520625,EM10E1039285)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation


    Distance to TSS:-67716
    Nearest PromoterID:XM_030249132.2
    Entrez ID:Rbfox1
    Nearest Unigene:XM_036159939
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:
    Gene Alias:
    Gene Type:
    CpG%:0.000000
    GC%:0.357143
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):