TSS:Rfmm 163138.1

Basic information about the TSS

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TSS ID: rfmm_163138.1 TSS ID(Version3): mm_149788.1 mm_149786.1 mm_149790.1 mm_149792.1 mm_149791.1 mm_149787.1 mm_149789.1 Species: mouse Chr: chr19		Start: 23118305 End: 23118627 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|GSE117655|PRJDB10397
Protocol	CAGE|TSS_database|CAGE_and_CAGEscan|deepCAGE|C1CAGE
TSS cluster detected*	5

  * The number of TSS cluster called data-sets (maximum 5)

cCREs annotation

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Description:	PLS,CTCF-bound (EM10D2607390,EM10E1075372)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENSMUST00000036884.3:0 AK028544:0 BC106117:0 GeneID: 16601 HGNC/MGI_ID: MGI:1333856 UniProt_ID: Q8CEC4 Nearer transcript ids and distances: LF257554:128 MA493131:128 BC138724:150 BC138725:150 LF257555:406 MA493132:406 CT010185:492 Y14296:492 view more...

Gene_name: Kruppel-like factor 9 Gene_symbol: Klf9 Gene_synonyms: 2310051E17Rik BTEB-1 Bteb1 Klf9 Gene_source: MGI:1333856

TATA-Box annotation

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Distance to TSS:	-124
Nearest PromoterID:	NM_010638.5
Entrez ID:	Klf9
Nearest Unigene:	NM_010638
Nearest Refseq:
Nearest Ensembl:
Gene Name:	Kruppel-like factor 9
Gene Alias:
Gene Type:
CpG%:	0.090062
GC%:	0.637771
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):	52(CCTTTTAAATGT,+,0.00)

TSS expression

Expression data not found.