TSS: Rfmm 33274.1: Difference between revisions

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Line 16: Line 16:
|gene_description=
|gene_description=
|gene_id=242316
|gene_id=242316
|gene_name=Gdf6
|gene_name=growth differentiation factor 6
|gene_source=MGI:95689
|gene_source=MGI:95689
|gene_symbol=Gdf6
|gene_symbol=Gdf6
Line 35: Line 35:
|strand=+
|strand=+
|tata_box=
|tata_box=
|transcript_name=ENSMUST00000057613.3 NM_013526.1 AJ537425
|transcript_name=ENSMUST00000057613.3 AJ537425
|tss_cluster_detected=1
|tss_cluster_detected=1
|tss_id=rfmm_33274.1
|tss_id=rfmm_33274.1

Latest revision as of 17:00, 19 March 2025

Basic information about the TSS


TSS ID:rfmm_33274.1
Species:mouse
Chr:chr4
Start:9844408
End:9844408
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS,CTCF-bound (EM10D2721717,EM10E1121595)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000057613.3:-36
AJ537425:-36
GeneID:242316
HGNC/MGI_ID:MGI:95689
UniProt_ID:A2AII0
Nearer transcript ids and distances:
  • BC141339:50
  • BC141340:50
view more...
Gene_name:growth differentiation factor 6
Gene_symbol:Gdf6
Gene_synonyms:BMP13
Gene_source:MGI:95689



TATA-Box annotation


Distance to TSS:36
Nearest PromoterID:NM_013526.1
Entrez ID:Gdf6
Nearest Unigene:NM_013526
Nearest Refseq:
Nearest Ensembl:
Gene Name:growth differentiation factor 6
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.