TSS: Rfmm 49110.1: Difference between revisions
From referenceTSS
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|gene_description= | |gene_description= | ||
|gene_id=78154 | |gene_id=78154 | ||
|gene_name= | |gene_name=RIKEN cDNA 4930430O22 gene | ||
|gene_source=MGI:1925404 | |gene_source=MGI:1925404 | ||
|gene_symbol=4930430O22Rik | |gene_symbol=4930430O22Rik | ||
Latest revision as of 21:22, 19 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | PLS,CTCF-bound (EM10D2796189,EM10E1152380) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -108 |
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| Nearest PromoterID: | NM_001376963.1 |
| Entrez ID: | Msi1 |
| Nearest Unigene: | XM_036164849 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA 4930430O22 gene |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.045455 |
| GC%: | 0.565217 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.