TSS: Rfmm 63479.1: Difference between revisions

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|gene_description=
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|gene_id=
|gene_name=Fiz1
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 01:20, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_63479.1
TSS ID(Version3):mm_64777.1
mm_64776.1
Species:mouse
Chr:chr7
Start:5016244
End:5016301
Strand:-
Source datasetsFANTOM5|PRJDB10397|DRA000914
ProtocolCAGE|C1CAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2042483,EM10E0841216)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_001110330.1:3
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENSMUST00000208944.2:7
  • AK135672:7
  • ENSMUST00000207946.2:-195
  • NM_001360243.1:-195
  • AK196020:243
  • AK203569:247
  • ENSMUST00000209060.2:-342
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-31
Nearest PromoterID:NM_001110330.1
Entrez ID:Fiz1
Nearest Unigene:NM_001360241
Nearest Refseq:
Nearest Ensembl:
Gene Name:
Gene Alias:
Gene Type:
CpG%:0.017544
GC%:0.551724
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):