TSS: Rfmm 69854.1: Difference between revisions

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|gene_description=
|gene_description=
|gene_id=269959
|gene_id=269959
|gene_name=Adamtsl3
|gene_name=ADAMTS-like 3
|gene_source=MGI:3028499
|gene_source=MGI:3028499
|gene_symbol=Adamtsl3
|gene_symbol=Adamtsl3

Latest revision as of 03:07, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_69854.1
Species:mouse
Chr:chr7
Start:81984943
End:81984967
Strand:+
Source datasetsFANTOM5|EPD|DRA000914
ProtocolCAGE|TSS_database|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:PLS (EM10D2875999,EM10E1187270)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000173287.8:-3
GeneID:269959
HGNC/MGI_ID:MGI:3028499
UniProt_ID:G3UXC7
Nearer transcript ids and distances:
  • ENSMUST00000172490.2:-41
  • NM_001190374.1:-41
view more...
Gene_name:ADAMTS-like 3
Gene_symbol:Adamtsl3
Gene_synonyms:9230119C12Rik punctin-2
Gene_source:MGI:3028499



TATA-Box annotation


Distance to TSS:53
Nearest PromoterID:NM_001190374.1
Entrez ID:Adamtsl3
Nearest Unigene:XM_006507894
Nearest Refseq:
Nearest Ensembl:
Gene Name:ADAMTS-like 3
Gene Alias:
Gene Type:
CpG%:0.166667
GC%:0.800000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.