TSS: Rfmm 76720.1: Difference between revisions

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|gene_description=
|gene_description=
|gene_id=100038927
|gene_id=100038927
|gene_name=Defa30
|gene_name=defensin, alpha, 30
|gene_source=MGI:3808881
|gene_source=MGI:3808881
|gene_symbol=Defa30
|gene_symbol=Defa30

Latest revision as of 05:02, 20 March 2025

Basic information about the TSS


TSS ID:rfmm_76720.1
Species:mouse
Chr:chr8
Start:21624627
End:21624643
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000098898.5:15
GeneID:100038927
HGNC/MGI_ID:MGI:3808881
UniProt_ID:E9QPZ2
Nearer transcript ids and distances:
  • NM_001177485.1:23
Gene_name:defensin, alpha, 30
Gene_symbol:Defa30
Gene_synonyms:Gm15284
Gene_source:MGI:3808881



TATA-Box annotation


Distance to TSS:-31
Nearest PromoterID:NM_001177485.1
Entrez ID:Defa30
Nearest Unigene:NM_001177485
Nearest Refseq:
Nearest Ensembl:
Gene Name:defensin, alpha, 30
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.470588
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.