TSS: Hg 113384.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=-533 |entrez_id=89797 |gc_percent=0.761194 |gene_alias=HELAD1|POMFIL2|RAINB1|STEERIN2|UNC53H2 |gene_description=neuron navigato...") |
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{{TSSDetail | {{TSSDetail | ||
|POMFIL2= | |||
|RAINB1= | |||
|STEERIN2= | |||
|UNC53H2= | |||
|chr=chr11 | |||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance= | |||
|distance_to_tss=-533 | |distance_to_tss=-533 | ||
|end=19712807 | |||
|entrez_id=89797 | |entrez_id=89797 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_145117 | |nearest_refseq=NM_145117 | ||
|nearest_unigene=Hs.64341 | |nearest_unigene=Hs.64341 | ||
|num_trans=0 | |||
|species=human | |||
|start=19712796 | |||
|strand=+ | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_113384.1 | |tss_id=hg_113384.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 03:15, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -533 |
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| Nearest PromoterID: | NM_145117 |
| Entrez ID: | 89797 |
| Nearest Unigene: | Hs.64341 |
| Nearest Refseq: | NM_145117 |
| Nearest Ensembl: | ENSG00000166833 |
| Gene Name: | NAV2 |
| Gene Alias: | HELAD1 |
| Gene Description: | neuron navigator 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |