TSS: Rfmm 99790.1: Difference between revisions

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|gene_description=
|gene_description=
|gene_id=52679
|gene_id=52679
|gene_name=E2f7
|gene_name=E2F transcription factor 7
|gene_source=MGI:1289147
|gene_source=MGI:1289147
|gene_symbol=E2f7
|gene_symbol=E2f7
Line 35: Line 35:
|strand=+
|strand=+
|tata_box=
|tata_box=
|transcript_name=ENSMUST00000173294.8 ENSMUST00000174857.8 ENSMUST00000174810.8 ENSMUST00000073781.12 ENSMUST00000173471.8 NM_178609.5 NM_001358560.1 AK051521 AK041481 AK031078 AY463359 AK143686 BC145429 BC150772 AK045040
|transcript_name=ENSMUST00000173294.8 ENSMUST00000174857.8 ENSMUST00000174810.8 ENSMUST00000073781.12 ENSMUST00000173471.8 AK051521 AK041481 AK031078 AY463359 AK143686 BC145429 BC150772 AK045040
|tss_cluster_detected=3
|tss_cluster_detected=3
|tss_id=rfmm_99790.1
|tss_id=rfmm_99790.1

Latest revision as of 11:27, 20 March 2025

Basic information about the TSS

TSS ID:rfmm_99790.1
Species:mouse
Chr:chr10
Start:110581295
End:110581394
Strand:+
Source datasetsPRJDB10397|GSE117655|DRA000914
ProtocolC1CAGE|deepCAGE|CAGE_and_CAGEscan
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation

Description:PLS,CTCF-bound (EM10D2340871,EM10E0964185)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:ENSMUST00000173294.8:0
ENSMUST00000174857.8:0
ENSMUST00000174810.8:0
ENSMUST00000073781.12:0
ENSMUST00000173471.8:0
AK051521:0
AK041481:0
AK031078:0
AY463359:0
AK143686:0
BC145429:0
BC150772:0
AK045040:0
GeneID:52679
HGNC/MGI_ID:MGI:1289147
UniProt_ID:Q6S7F2 Q8BQ55
Nearer transcript ids and distances:
  • ENSMUST00000173634.2:39
  • AK184642:113
view more...
Gene_name:E2F transcription factor 7
Gene_symbol:E2f7
Gene_synonyms:A630014C11Rik D10Ertd739e E2F7
Gene_source:MGI:1289147



TATA-Box annotation

Distance to TSS:44
Nearest PromoterID:NM_178609.5
Entrez ID:E2f7
Nearest Unigene:NM_001358560
Nearest Refseq:
Nearest Ensembl:
Gene Name:E2F transcription factor 7
Gene Alias:
Gene Type:
CpG%:0.070707
GC%:0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.
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