TSS: Hg 117287.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-48955 |entrez_id=100616319 |gc_percent=0.716418 |gene_alias=- |gene_description=microRNA 4493 |gene_name=MIR4493 |gene_type=ncRN...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000533341.2:263 ENST00000623141.1:319 | |||
|chr=chr11 | |||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=263 | |||
|distance_to_tss=-48955 | |distance_to_tss=-48955 | ||
|end=123430474 | |||
|entrez_id=100616319 | |entrez_id=100616319 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_039714 | |nearest_refseq=NR_039714 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans=2 | |||
|species=human | |||
|start=123430459 | |||
|strand=+ | |||
|transcript_name=ENST00000533341.2 | |||
|tss_classification=no | |||
|tss_id=hg_117287.1 | |tss_id=hg_117287.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 06:01, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -48955 |
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| Nearest PromoterID: | NR_039714 |
| Entrez ID: | 100616319 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039714 |
| Nearest Ensembl: | ENSG00000265357 |
| Gene Name: | MIR4493 |
| Gene Alias: | - |
| Gene Description: | microRNA 4493 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |