TSS: Hg 119367.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=5783 |entrez_id=6506 |gc_percent=0.532338 |gene_alias=EAAT2|EIEE41|GLT-1|HBGT |gene_description=solute carrier family 1 member 2...") |
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{{TSSDetail | {{TSSDetail | ||
|EIEE41= | |||
|GLT-1= | |||
|HBGT= | |||
|chr=chr11 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |||
|distance_to_tss=5783 | |distance_to_tss=5783 | ||
|end=35413785 | |||
|entrez_id=6506 | |entrez_id=6506 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_004171 | |nearest_refseq=NM_004171 | ||
|nearest_unigene=Hs.502338 | |nearest_unigene=Hs.502338 | ||
|num_trans=0 | |||
|species=human | |||
|start=35413765 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_119367.1 | |tss_id=hg_119367.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 07:30, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 5783 |
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| Nearest PromoterID: | NM_004171 |
| Entrez ID: | 6506 |
| Nearest Unigene: | Hs.502338 |
| Nearest Refseq: | NM_004171 |
| Nearest Ensembl: | ENSG00000110436 |
| Gene Name: | SLC1A2 |
| Gene Alias: | EAAT2 |
| Gene Description: | solute carrier family 1 member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |