TSS: Hg 120511.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=2 |entrez_id=105369343 |gc_percent=0.621891 |gene_alias=- |gene_description=MIR194-2 host gene |gene_name=MIR194-2HG |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000413053.2:0 NR_133639:0 NR_133640:0 NR_133638:0 uc010rnr.2:0 AB429223:0 AB429224:0 AK092802:0 | |||
|chr=chr11 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=64893450 | |||
|entrez_id=105369343 | |entrez_id=105369343 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=MIR194-2 host gene | |gene_description=MIR194-2 host gene | ||
|gene_name=MIR194-2HG | |gene_id=105369343 | ||
|gene_name=MIR194-2 host gene | |||
|gene_source=HGNC:51946 | |||
|gene_symbol=MIR194-2HG | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:51946 | |||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_133639 | |nearest_promoter_id=NR_133639 | ||
|nearest_refseq=NR_133638 | |nearest_refseq=NR_133638 | ||
|nearest_unigene=Hs.199371 | |nearest_unigene=Hs.199371 | ||
|num_trans=8 | |||
|species=human | |||
|start=64893444 | |||
|strand=- | |||
|transcript_name=ENST00000413053.2 NR_133639 NR_133640 NR_133638 uc010rnr.2 AB429223 AB429224 AK092802 | |||
|tss_classification=yes | |||
|tss_id=hg_120511.1 | |tss_id=hg_120511.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 08:19, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NR_133639 |
| Entrez ID: | 105369343 |
| Nearest Unigene: | Hs.199371 |
| Nearest Refseq: | NR_133638 |
| Nearest Ensembl: | |
| Gene Name: | MIR194-2 host gene |
| Gene Alias: | - |
| Gene Description: | MIR194-2 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.