TSS: Hg 120517.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=0 |entrez_id=283129 |gc_percent=0.661692 |gene_alias=C11orf85 |gene_description=membrane anchored junction protein |gene_name=MA...") |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000530735.5:0 NM_001037225:0 NM_001300803:0 NM_001318808:0 uc001occ.2:0 AK093130:0 ENST00000530444.5:48 uc001ocd.2:48 BC033501:48 ENST00000301896.5:185 uc058dbv.1:185 | |||
|chr=chr11 | |||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |||
|distance_to_tss=0 | |distance_to_tss=0 | ||
|end=64972111 | |||
|entrez_id=283129 | |entrez_id=283129 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=C11orf85 | |gene_alias=C11orf85 | ||
|gene_description=membrane anchored junction protein | |gene_description=membrane anchored junction protein | ||
|gene_name= | |gene_id=283129 | ||
|gene_name=chromosome 11 open reading frame 85 | |||
|gene_source=HGNC:27441 | |||
|gene_symbol=C11orf85 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:27441 | |||
|nearest_ensembl=ENSG00000168070 | |nearest_ensembl=ENSG00000168070 | ||
|nearest_promoter_id=NM_001300803 | |nearest_promoter_id=NM_001300803 | ||
|nearest_refseq=NM_001037225 | |nearest_refseq=NM_001037225 | ||
|nearest_unigene=Hs.567793 | |nearest_unigene=Hs.567793 | ||
|num_trans=11 | |||
|species=human | |||
|start=64972070 | |||
|strand=- | |||
|transcript_name=ENST00000530735.5 NM_001037225 NM_001300803 NM_001318808 uc001occ.2 AK093130 | |||
|tss_classification=yes | |||
|tss_id=hg_120517.1 | |tss_id=hg_120517.1 | ||
|tss_score=1 | |||
|uniprot_id=E9PRZ4 Q3KP22 | |||
}} | }} | ||
Revision as of 08:20, 9 March 2018
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_001300803 |
| Entrez ID: | 283129 |
| Nearest Unigene: | Hs.567793 |
| Nearest Refseq: | NM_001037225 |
| Nearest Ensembl: | ENSG00000168070 |
| Gene Name: | chromosome 11 open reading frame 85 |
| Gene Alias: | C11orf85 |
| Gene Description: | membrane anchored junction protein |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.