TSS: Hg 92414.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000519902.1:15 BC034827:15 BC051742:21 |chr=chr8 |cpg_percent=0.12 |distance=15 |distance_to_tss=-18 |end=26383010 |entrez_id=665 |gc_percent=0.72...") |
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{{TSSDetail | {{TSSDetail | ||
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|all_trans=ENST00000519902.1:15 BC034827:15 BC051742:21 | |all_trans=ENST00000519902.1:15 BC034827:15 BC051742:21 | ||
|chr=chr8 | |chr=chr8 | ||
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|distance_to_tss=-18 | |distance_to_tss=-18 | ||
|end=26383010 | |end=26383010 | ||
|end_of_center_position=26382989 | |||
|entrez_id=665 | |entrez_id=665 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
|gene_alias=BNIP3a | |gene_alias=BNIP3a | ||
|gene_description=BCL2 interacting protein 3 like | |gene_description=BCL2 interacting protein 3 like | ||
|gene_id=157489 | |gene_id=157489 | ||
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|species=human | |species=human | ||
|start=26382967 | |start=26382967 | ||
|start_of_center_position=26382988 | |||
|strand=- | |strand=- | ||
|tata_box="-57(CCTTTTCTGCGC,+,0.00)" | |tata_box="-57(CCTTTTCTGCGC,+,0.00)" | ||
Revision as of 16:39, 10 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -18 |
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| Nearest PromoterID: | NM_004331 |
| Entrez ID: | 665 |
| Nearest Unigene: | Hs.131226 |
| Nearest Refseq: | NM_004331 |
| Nearest Ensembl: | ENSG00000104765 |
| Gene Name: | SDA1 domain containing 1 pseudogene 1 |
| Gene Alias: | BNIP3a |
| Gene Description: | BCL2 interacting protein 3 like |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-57(CCTTTTCTGCGC,+,0.00)" |
TSS expression
Expression data not found.