TSS: Mm 159363.1: Difference between revisions

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(Created page with "{{TSSDetail |all_trans=uc008pso.1:-8 AK170102:15 |chr=chr3 |cpg_percent=0.02 |distance=-8 |distance_to_tss=19130 |end=87729493 |entrez_id=74485 |gc_percent=0.547264 |gene_alia...")
 
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|distance_to_tss=19130
|distance_to_tss=19130
|end=87729493
|end=87729493
|end_of_center_position=87729493
|entrez_id=74485
|entrez_id=74485
|gc_percent=0.547264
|gc_percent=0.547264
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|species=mouse
|species=mouse
|start=87729492
|start=87729492
|start_of_center_position=87729492
|strand=+
|strand=+
|transcript_name=uc008pso.1
|transcript_name=uc008pso.1

Revision as of 17:38, 10 May 2019

Basic information about the TSS


TSS ID:mm_159363.1
Species:mouse
Chr:chr3
Start:87729492
End:87729493
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:uc008pso.1
Distance:-8
GeneID:213498
HGNC/MGI_ID:MGI:2441869
UniProt_ID:Q7TQK9
Gene_name:Rho guanine nucleotide exchange factor (GEF) 11
Gene_symbol:Arhgef11
Gene_synonyms:PDZ-RhoGEF Prg
Gene_source:MGI:2441869



TATA-Box annotation


Distance to TSS:19130
Nearest PromoterID:NM_028971
Entrez ID:74485
Nearest Unigene:Mm.474494
Nearest Refseq:NM_028971
Nearest Ensembl:ENSMUSG00000023084
Gene Name:Rho guanine nucleotide exchange factor (GEF) 11
Gene Alias:4933430H15Rik
Gene Description:leucine rich repeat containing 71
Gene Type:protein-coding
CpG%:0.02
GC%:0.547264
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.