TSS: Hg 1070.1: Difference between revisions

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|distance_to_tss=279
|distance_to_tss=279
|end=19608095
|end=19608095
|end_of_center_position=19608086
|entrez_id=644068
|entrez_id=644068
|gc_percent=0.452736
|gc_percent=0.452736
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|species=human
|species=human
|start=19608076
|start=19608076
|start_of_center_position=19608085
|strand=+
|strand=+
|tata_box="-88(CCATATAGAGAA,+,0.00),-65(TCGCTTAAAAGG,-,0.00),-63(GCTTAAAAGGGT,+,0.00),-18(ACCTATAAGAGC,-,0.00)"
|tata_box="-88(CCATATAGAGAA,+,0.00),-65(TCGCTTAAAAGG,-,0.00),-63(GCTTAAAAGGGT,+,0.00),-18(ACCTATAAGAGC,-,0.00)"

Revision as of 18:55, 10 May 2019

Basic information about the TSS

TSS ID:hg_1070.1
Species:human
Chr:chr1
Start:19608076
End:19608095
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000457263.1 CU687246 HQ447545 KJ904328
Distance:19
GeneID:644068
HGNC/MGI_ID:HGNC:35797
UniProt_ID:
Gene_name:ribosomal protein S14 pseudogene 3
Gene_symbol:RPS14P3
Gene_synonyms:
Gene_source:HGNC:35797



TATA-Box annotation

Distance to TSS:279
Nearest PromoterID:NR_077246
Entrez ID:644068
Nearest Unigene:Hs.660760
Nearest Refseq:NR_077246
Nearest Ensembl:
Gene Name:ribosomal protein S14 pseudogene 3
Gene Alias:RPS14_1_16
Gene Description:ribosomal protein S14 pseudogene 3
Gene Type:pseudo
CpG%:0.035
GC%:0.452736
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-88(CCATATAGAGAA,+,0.00),-65(TCGCTTAAAAGG,-,0.00),-63(GCTTAAAAGGGT,+,0.00),-18(ACCTATAAGAGC,-,0.00)"



TSS expression

Expression data not found.

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