TSS: Hg 93429.1: Difference between revisions

Revision as of 20:14, 10 May 2019

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000520348.5 ENST00000521399.5 ENST00000521127.1 NR_002599 uc064nkt.1 uc064nku.1 uc003xxb.2 AY264285 AK057116
Distance:	0
GeneID:	641638
HGNC/MGI_ID:	HGNC:32965
UniProt_ID:

Gene_name:	small nucleolar RNA host gene 6
Gene_symbol:	SNHG6
Gene_synonyms:	HBII-276HG NCRNA00058 U87HG
Gene_source:	HGNC:32965

TATA-Box annotation

Distance to TSS:	3
Nearest PromoterID:	NR_002599
Entrez ID:	641638
Nearest Unigene:	Hs.372680
Nearest Refseq:	NR_002599
Nearest Ensembl:
Gene Name:	small nucleolar RNA host gene 6
Gene Alias:	HBII-276HG
Gene Description:	small nucleolar RNA host gene 6
Gene Type:	ncRNA
CpG%:	0.13
GC%:	0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
+|NCRNA00058=
+|U87HG=
 |all_trans=ENST00000520348.5:0 ENST00000521399.5:0 ENST00000521127.1:0 NR_002599:0 uc064nkt.1:0 uc064nku.1:0 uc003xxb.2:0 AY264285:0 AK057116:0 ENST00000520944.5:-49 uc003xxa.2:-49
 |chr=chr8
@@ Line 6: / Line 8: @@
 |distance_to_tss=3
 |end=66925547
+|end_of_center_position=66925539
 |entrez_id=641638
 |gc_percent=0.706468
-|gene_alias=HBII-276HG|NCRNA00058|U87HG
+|gene_alias=HBII-276HG
 |gene_description=small nucleolar RNA host gene 6
 |gene_id=641638
@@ Line 24: / Line 27: @@
 |species=human
 |start=66925530
+|start_of_center_position=66925538
 |strand=-
 |transcript_name=ENST00000520348.5 ENST00000521399.5 ENST00000521127.1 NR_002599 uc064nkt.1 uc064nku.1 uc003xxb.2 AY264285 AK057116